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A workshop on an accessible metagenomics toolkit for decoding microbial contributions to biogeochemical cycles organized by ISME Latin America 2025.
Kick off the academic year with KBase Educators for an orientation to the Educators Community and teaching resources! We will go over how Narratives and teaching resources are laid out…
Session 1 provides an overview of the microbial genome analysis workflow and introduces the free and open-access KBase platform to participants.
Session 2 introduces quality control (trimming and filtering) of raw sequence data, gets a taxonomic snapshot and prepares the data for metagenome assembly of contiguous sequences. Then, the session will…
Previous
events
Have you heard (or not) of the FAIR (findable, accessible, interoperable, and reusable) data principles, and wonder why they are relevant to your research? The Department of Energy Systems Biology…
The KBase team will participate in the third MCC meeting that convenes microbiome centers from across the United States.
The 2025 Microbiomes in Computational Research Opportunities Network Northeast Regional Workshop will take place at the University of Massachusetts – Amherst, May 20-22. This training workshop will orient MICROnet participants…
From Bench to Publication: Identification and Analysis of Microbial Isolate Genomes – a four-part webinar series in collaboration with the American Society for Microbiology
Session 4…
From Bench to Publication: Identification and Analysis of Microbial Isolate Genomes – a four-part webinar series in collaboration with the American Society for Microbiology
Session 3…
From Bench to Publication: Identification and Analysis of Microbial Isolate Genomes – a four-part webinar series in collaboration with the American Society for Microbiology
Session 2…
KBase Workshops for Faculty and Staff at Northeastern Illinois University (NEIU)
Workshops:
Thursday and Friday, March 27 & 28
9:00AM – 2:00PM
Seminar: Thursday, March 27
3:00-4:00PM
From Bench to Publication: Identification and Analysis of Microbial Isolate Genomes – a four-part webinar series in collaboration with the American Society for Microbiology
KBase Organizations
Organizations allow colleagues to share Narratives and data between users working on a single project or across whole institutions. Members of an Organization can see each other’s Narratives and be notified when members of an organization add data or analyses to the system. This allows you to manage, track, and maintain your project’s resources on KBase.
The Genome Resolved Open Watersheds database is a free and open resource available to community members..
Research within the Ecosystems and Networks Integrated with Genes and Molecular Assemblies (ENIGMA) project emphasizes achieving a multiscale, causal, and predictive understanding of microbial biology and the reciprocal impact of microbial communities on their ecosystems.
Publicly available High Quality non-redundant Metagenome-Annotated Genomes from the A Genomic Catalogue of Earth’s Microbiomes publication.
Explore published metabolic models for isolate microorganisms created and curated by Christopher Henry’s laboratory at Argonne National Laboratory.
Learn from world-class researchers how to use microbial metagenomic and environmental metabolite data from the Environmental Molecular Sciences Laboratory and Pacific Northwest National Laboratory.
KBase Educators
Teaching with KBase? Join the KBase Educators Community to learn how the Narrative can be adapted to your curriculum.
Help us improve the KBase experience
We’re continually working to make KBase a more robust and powerful tool for the Systems Biology community. If you’re interested in helping improve the platform, sign up to test new KBase Apps and features before they are released.
