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Advanced Genomic Feature Analysis Using Open Access Tools: Session 2 demonstrates using KBase’s functional profiling and comparative genomics tools to analyze sets of isolate genomes. This session walks through how…
Advanced Genomic Feature Analysis Using Open Access Tools: Session 3 introduces the basics of metabolic modeling in KBase. During this session, participants will construct and gapfill metabolic models, perform flux…
Advanced Genomic Feature Analysis Using Open Access Tools: Session 4 introduces the RNA-seq tools in KBase for analyzing gene expression patterns across different samples. This session will demonstrate how to…
MICROnet is hosting our 3rd workshop at ASMCUE! Add on the pre-conference workshop “From Course to Publication: A Guide to Environmental Microbiome Analysis With Students” at no additional cost when…
Previous
events
Advanced Genomic Feature Analysis Using Open Access Tools:
Session 1 demonstrates using KBase to identify and characterize gene features in bacterial genomes. This session will cover how to construct…
The Australian Microbiome Metagenomic Analysis workshop will provide hands-on instruction for participants to use online, open-access methods to find, access, and analyze publicly available datasets. The workshop will cover metagenomic…
KBase will be at ISME20 in Auckland, New Zealand this August! Find the team at our presentations and our joint booth with the Joint Genome Institute!
KBase will co-lead a metagenomic data analysis workshop on soil microbiome data. See the event page for more information.
The first in a 2-part series will cover analysis of microbial isolate genomes—from raw sequence data through to data publication—in a modularized format that uses KBase’s reproducible notebook workflows
This workshop will introduce the Department of Energy Systems Biology Knowledgebase (kbase.us) and showcase popular protocols for multi-omics analysis on the platform. Attendees will learn how to import data and…
The first in a 2-part series will cover analysis of microbial isolate genomes—from raw sequence data through to data publication—in a modularized format that uses KBase’s reproducible notebook workflows
The first in a 2-part series will cover analysis of microbial isolate genomes—from raw sequence data through to data publication—in a modularized format that uses KBase’s reproducible notebook workflows.
KBase Organizations
Organizations allow colleagues to share Narratives and data between users working on a single project or across whole institutions. Members of an Organization can see each other’s Narratives and be notified when members of an organization add data or analyses to the system. This allows you to manage, track, and maintain your project’s resources on KBase.
The Genome Resolved Open Watersheds database is a free and open resource available to community members..
Research within the Ecosystems and Networks Integrated with Genes and Molecular Assemblies (ENIGMA) project emphasizes achieving a multiscale, causal, and predictive understanding of microbial biology and the reciprocal impact of microbial communities on their ecosystems.
Publicly available High Quality non-redundant Metagenome-Annotated Genomes from the A Genomic Catalogue of Earth’s Microbiomes publication.
Explore published metabolic models for isolate microorganisms created and curated by Christopher Henry’s laboratory at Argonne National Laboratory.
Learn from world-class researchers how to use microbial metagenomic and environmental metabolite data from the Environmental Molecular Sciences Laboratory and Pacific Northwest National Laboratory.
KBase Educators
Teaching with KBase? Join the KBase Educators Community to learn how the Narrative can be adapted to your curriculum.
Help us improve the KBase experience
We’re continually working to make KBase a more robust and powerful tool for the Systems Biology community. If you’re interested in helping improve the platform, sign up to test new KBase Apps and features before they are released.
