Welcome!
The 2021 Multi-Omics Modeling of Biochemical Pathways course was a virtual course hosted by the Environmental Molecular Sciences Laboratory (EMSL) and Pacific Northwest National Laboratory (PNNL), featuring experts from EMSL, PNNL, Agile BioFoundry, and KBase.
Materials from this course cover visualization tools, analysis, and modeling of multi-omics data for understanding biochemical pathways. The curriculum includes lectures around topics of experimental design, transcriptome and proteome data, metabolomics and lipidomics data, metabolic modeling, and fluxomics.
The curriculum for modeling is accessible to the community as part of the EMSL 2021 Summer School – Multi-omics Modeling of Biochemical Pathways Organization in KBase. Create a KBase account and request to join the KBase Org to get started today!
Course Elements
Overview | EMSL Summer School 2021 Playlist on YouTube | KBase Org
Summary – Corydon Ireland
Presenters:
Kristin E. Burnum-Johnson, Scott Baker, Lee Ann McCue & Nathalie Munoz, EMSL
Jon Magnuson & Lisa Bramer, PNNL
Day 1 on EMSL LEARNSummary – Corydon Ireland
Presenters:
Kristin E. Burnum Johnson & Aivett Bilbao, EMSL
Yuqian Gao, PNNL
Day 2 on EMSL LEARNSummary – Corydon Ireland
Presenters:
Nathalie Munoz, Robert Young, & William Kew, EMSL
Young-Mo Kim, PNNL
Day 3 on EMSL LEARNSummary – Corydon Ireland
Presenters:
Kelly Stratton, David Degnan, Lisa Bramer, & Rachel Richardson, PNNL
Day 4 on EMSL LEARNSummary – Corydon Ireland
Presenters:
Jeremy Zucker, PNNL
Janaka Edirisinghe & Chris Henry, KBase and Argonne National Laboratory
Narratives
available at EMSL 2021 Summer School – Multi-omics Modeling of Biochemical Pathways Organization
Day 5 on EMSL LEARN
